16S Ribosomal RNA Gene Primer Selection


16S Ribosomal RNA Gene Primer Selection

Region coverage available:

  • V1 – V3
  • V3 – V4
  • V4 – V5

Primer details:

  • 27f: 5’-AGAGTTTGATCCTGGCTCAG-3’; Lane et al.
  • 27f Modified: 5’-AGMGTTYGATYMTGGCTCAG-3’; Walker et al.
  • Illuminaf: 5’-CCTACGGGNGGCWGCAG-3’
  • 515f Original: 5′-GTGCCAGCMGCCGCGGTAA-3′, Caporaso et al.
  • 515f Modified: 5′-GTGYCAGCMGCCGCGGTAA-3′, Parada et al.
  • 534r: 5’-ATTACCGCGGCTGCTGG-3’; Muyzer et al.
  • 806r Original: 5’-GGACTACHVGGGTWTCTAAT-3’, Caporaso et al.
  • 806r Modified: 5’-GGACTAC NVGGGTWTCTAAT-3’, Apprill et al.
  • Illumina R: 5’-GACTACHVGGGTATCTAATCC-3’
  • 926r: 5’-CCGYCAATTYMTTTRAGTTT-3’, Parada et al.